Protein fold prediction (York)

Application domain: Protein fold prediction
Source: SCOP database + PROMOTIF tool
Dataset size: 4 classes, 9153 domains, 630 families, 298 folds
Data format: Progol
Systems used: Progol4.4
References: (Turcotte et al. 1998)
Pointers: http://www.icnet.uk/bmm/people/turcotte/ilp98/

ILP has been applied to discover rules governing the three-dimensional topology of protein structure (Trucotte et al. 1998). The application makes use of a new feature of Progol4.4 for numeric parameter estimation.

Bibliography

  1. M. Turcotte, S.H. Muggleton, and M.J.E. Sternberg. Application of ILP to discover rules governing the three-dimensional topology of protein structure. In C.D. Page, editor, Proc. of the 8th International Workshop on Inductive Logic Programming (ILP-98), LNAI 1446, pages 53-64, Berlin, 1998. Springer-Verlag.


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